grafeno.operations.markov_cluster module

grafeno.operations.markov_cluster.add_diag(A, mult_factor)

grafeno.operations.markov_cluster.cluster(graph, expand_factor=2, inflate_factor=2, max_loop=10, mult_factor=1)

grafeno.operations.markov_cluster.expand(A, expand_factor)

grafeno.operations.markov_cluster.get_clusters(A)

grafeno.operations.markov_cluster.inflate(A, inflate_factor)

grafeno.operations.markov_cluster.mcl(M, expand_factor=2, inflate_factor=2, max_loop=10, mult_factor=1)

grafeno.operations.markov_cluster.normalize(A)

grafeno.operations.markov_cluster.operate(graph, **args)

grafeno.operations.markov_cluster.stop(M, i)